Initial commit of Luke Shumaker's "dot-files".

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+;;; ob-exp.el --- Exportation of org-babel source blocks
+
+;; Copyright (C) 2009, 2010  Free Software Foundation, Inc.
+
+;; Author: Eric Schulte, Dan Davison
+;; Keywords: literate programming, reproducible research
+;; Homepage: http://orgmode.org
+;; Version: 7.4
+
+;; This file is part of GNU Emacs.
+
+;; GNU Emacs is free software: you can redistribute it and/or modify
+;; it under the terms of the GNU General Public License as published by
+;; the Free Software Foundation, either version 3 of the License, or
+;; (at your option) any later version.
+
+;; GNU Emacs is distributed in the hope that it will be useful,
+;; but WITHOUT ANY WARRANTY; without even the implied warranty of
+;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;; GNU General Public License for more details.
+
+;; You should have received a copy of the GNU General Public License
+;; along with GNU Emacs.  If not, see <http://www.gnu.org/licenses/>.
+
+;;; Commentary:
+
+;; See the online documentation for more information
+;; 
+;;   http://orgmode.org/worg/org-contrib/babel/
+
+;;; Code:
+(require 'ob)
+(require 'org-exp-blocks)
+(eval-when-compile
+  (require 'cl))
+
+(defvar obe-marker nil)
+(defvar org-current-export-file)
+(defvar org-babel-lob-one-liner-regexp)
+(defvar org-babel-ref-split-regexp)
+(declare-function org-babel-lob-get-info "ob-lob" ())
+(declare-function org-babel-eval-wipe-error-buffer "ob-eval" ())
+(add-to-list 'org-export-interblocks '(src org-babel-exp-inline-src-blocks))
+(add-to-list 'org-export-interblocks '(lob org-babel-exp-lob-one-liners))
+(add-hook 'org-export-blocks-postblock-hook 'org-exp-res/src-name-cleanup)
+
+(org-export-blocks-add-block '(src org-babel-exp-src-blocks nil))
+
+(defcustom org-export-babel-evaluate t
+  "Switch controlling code evaluation during export.
+When set to nil no code will be evaluated as part of the export
+process."
+  :group 'org-babel
+  :type 'boolean)
+(put 'org-export-babel-evaluate 'safe-local-variable (lambda (x) (eq x nil)))
+
+(defvar org-babel-function-def-export-keyword "function"
+  "The keyword to substitute for the source name line on export.
+When exporting a source block function, this keyword will
+appear in the exported version in the place of source name
+line. A source block is considered to be a source block function
+if the source name is present and is followed by a parenthesized
+argument list. The parentheses may be empty or contain
+whitespace. An example is the following which generates n random
+\(uniform) numbers.
+
+#+source: rand(n)
+#+begin_src R
+  runif(n)
+#+end_src")
+
+(defvar org-babel-function-def-export-indent 4
+  "Number of characters to indent a source block on export.
+When exporting a source block function, the block contents will
+be indented by this many characters. See
+`org-babel-function-def-export-name' for the definition of a
+source block function.")
+
+(defmacro org-babel-exp-in-export-file (&rest body)
+  `(let* ((lang-headers (intern (concat "org-babel-default-header-args:" lang)))
+	  (heading (nth 4 (ignore-errors (org-heading-components))))
+	  (link (when org-current-export-file
+		  (org-make-link-string
+		   (if heading
+		       (concat org-current-export-file "::" heading)
+		     org-current-export-file))))
+	  (export-buffer (current-buffer)) results)
+     (when link
+       ;; resolve parameters in the original file so that
+       ;; headline and file-wide parameters are included, attempt
+       ;; to go to the same heading in the original file
+       (set-buffer (get-file-buffer org-current-export-file))
+       (save-restriction
+	 (condition-case nil
+	     (org-open-link-from-string link)
+	   (error (when heading
+		    (goto-char (point-min))
+		    (re-search-forward (regexp-quote heading) nil t))))
+	 (setq results ,@body))
+       (set-buffer export-buffer)
+       results)))
+
+(defun org-babel-exp-src-blocks (body &rest headers)
+  "Process source block for export.
+Depending on the 'export' headers argument in replace the source
+code block with...
+
+both ---- display the code and the results
+
+code ---- the default, display the code inside the block but do
+          not process
+
+results - just like none only the block is run on export ensuring
+          that it's results are present in the org-mode buffer
+
+none ----- do not display either code or results upon export"
+  (interactive)
+  (message "org-babel-exp processing...")
+  (save-excursion
+    (goto-char (match-beginning 0))
+    (let* ((info (org-babel-get-src-block-info 'light))
+	   (lang (nth 0 info))
+	   (raw-params (nth 2 info)))
+      ;; bail if we couldn't get any info from the block
+      (when info
+	(org-babel-exp-in-export-file
+	 (setf (nth 2 info)
+	       (org-babel-merge-params
+		org-babel-default-header-args
+		(org-babel-params-from-buffer)
+		(org-babel-params-from-properties lang)
+		(if (boundp lang-headers) (eval lang-headers) nil)
+		raw-params)))
+	;; expand noweb references in the original file
+	(setf (nth 1 info)
+	      (if (and (cdr (assoc :noweb (nth 2 info)))
+		       (string= "yes" (cdr (assoc :noweb (nth 2 info)))))
+		  (org-babel-expand-noweb-references
+		   info (get-file-buffer org-current-export-file))
+		(nth 1 info)))
+	(org-babel-exp-do-export info 'block)))))
+
+(defun org-babel-exp-inline-src-blocks (start end)
+  "Process inline source blocks between START and END for export.
+See `org-babel-exp-src-blocks' for export options, currently the
+options and are taken from `org-babel-default-inline-header-args'."
+  (interactive)
+  (save-excursion
+    (goto-char start)
+    (while (and (< (point) end)
+                (re-search-forward org-babel-inline-src-block-regexp end t))
+      (let* ((info (save-match-data (org-babel-parse-inline-src-block-match)))
+	     (params (nth 2 info))
+	     (replacement
+	      (save-match-data
+		(if (org-babel-in-example-or-verbatim)
+		    (buffer-substring (match-beginning 0) (match-end 0))
+		  ;; expand noweb references in the original file
+		  (setf (nth 1 info)
+			(if (and (cdr (assoc :noweb params))
+				 (string= "yes" (cdr (assoc :noweb params))))
+			    (org-babel-expand-noweb-references
+			     info (get-file-buffer org-current-export-file))
+			  (nth 1 info)))
+		  (org-babel-exp-do-export info 'inline)))))
+	(setq end (+ end (- (length replacement) (length (match-string 1)))))
+	(replace-match replacement t t nil 1)))))
+
+(defun org-exp-res/src-name-cleanup ()
+  "Clean up #+results and #+srcname lines for export.
+This function should only be called after all block processing
+has taken place."
+  (interactive)
+  (save-excursion
+    (goto-char (point-min))
+    (while (org-re-search-forward-unprotected
+	    (concat
+	     "\\("org-babel-src-name-regexp"\\|"org-babel-result-regexp"\\)")
+	    nil t)
+      (delete-region
+       (progn (beginning-of-line) (point))
+       (progn (end-of-line) (+ 1 (point)))))))
+
+(defun org-babel-in-example-or-verbatim ()
+  "Return true if point is in example or verbatim code.
+Example and verbatim code include escaped portions of
+an org-mode buffer code that should be treated as normal
+org-mode text."
+  (or (org-in-indented-comment-line) 
+      (save-excursion
+	(save-match-data
+	  (goto-char (point-at-bol))
+	  (looking-at "[ \t]*:[ \t]")))
+      (org-in-regexps-block-p "^[ \t]*#\\+begin_src" "^[ \t]*#\\+end_src")))
+
+(defun org-babel-exp-lob-one-liners (start end)
+  "Process Library of Babel calls between START and END for export.
+See `org-babel-exp-src-blocks' for export options. Currently the
+options are taken from `org-babel-default-header-args'."
+  (interactive)
+  (let (replacement)
+    (save-excursion
+      (goto-char start)
+      (while (and (< (point) end)
+		  (re-search-forward org-babel-lob-one-liner-regexp nil t))
+	(setq replacement
+	      (let ((lob-info (org-babel-lob-get-info)))
+		(save-match-data
+		  (org-babel-exp-do-export
+		   (list "emacs-lisp" "results"
+			 (org-babel-merge-params
+			  org-babel-default-header-args
+			  (org-babel-params-from-buffer)
+			  (org-babel-params-from-properties)
+			  (org-babel-parse-header-arguments
+			   (org-babel-clean-text-properties
+			    (concat ":var results="
+				    (mapconcat #'identity
+					       (butlast lob-info) " ")))))
+			 (car (last lob-info)))
+		   'lob))))
+	(setq end (+ end (- (length replacement) (length (match-string 0)))))
+	(replace-match replacement t t)))))
+
+(defun org-babel-exp-do-export (info type)
+  "Return a string with the exported content of a code block.
+The function respects the value of the :exports header argument."
+  (flet ((silently () (let ((session (cdr (assoc :session (nth 2 info)))))
+			(when (and session
+				   (not (equal "none" session)))
+			  (org-babel-exp-results info type 'silent))))
+	 (clean () (org-babel-remove-result info)))
+    (case (intern (or (cdr (assoc :exports (nth 2 info))) "code"))
+      ('none (silently) (clean) "")
+      ('code (silently) (clean) (org-babel-exp-code info type))
+      ('results (org-babel-exp-results info type))
+      ('both (concat (org-babel-exp-code info type)
+		     "\n\n"
+		     (org-babel-exp-results info type))))))
+
+(defvar backend)
+(defun org-babel-exp-code (info type)
+  "Prepare and return code in the current code block for export.
+Code is prepared in a manner suitable for export by
+org-mode.  This function is called by `org-babel-exp-do-export'.
+The code block is not evaluated."
+  (let ((lang (nth 0 info))
+        (body (nth 1 info))
+        (switches (nth 3 info))
+        (name (nth 4 info))
+        (args (mapcar #'cdr (org-babel-get-header (nth 2 info) :var))))
+    (case type
+      ('inline (format "=%s=" body))
+      ('block
+	  (let ((str
+		 (format "#+BEGIN_SRC %s %s\n%s%s#+END_SRC\n" lang switches body
+			 (if (and body (string-match "\n$" body))
+			     "" "\n"))))
+	    (when name
+	      (add-text-properties
+	       0 (length str)
+	       (list 'org-caption
+		     (format "%s(%s)"
+			     name
+			     (mapconcat #'identity args ", ")))
+	       str))
+	    str))
+      ('lob
+       (let ((call-line (and (string-match "results=" (car args))
+			     (substring (car args) (match-end 0)))))
+	 (cond
+	  ((eq backend 'html)
+	   (format "\n#+HTML: <label class=\"org-src-name\">%s</label>\n"
+		   call-line))
+	  ((format ": %s\n" call-line))))))))
+
+(defun org-babel-exp-results (info type &optional silent)
+  "Evaluate and return the results of the current code block for export.
+Results are prepared in a manner suitable for export by org-mode.
+This function is called by `org-babel-exp-do-export'.  The code
+block will be evaluated.  Optional argument SILENT can be used to
+inhibit insertion of results into the buffer."
+  (or
+   (when org-export-babel-evaluate
+     (let ((lang (nth 0 info))
+	   (body (nth 1 info)))
+       (setf (nth 2 info) (org-babel-exp-in-export-file
+			   (org-babel-process-params (nth 2 info))))
+       ;; skip code blocks which we can't evaluate
+       (when (fboundp (intern (concat "org-babel-execute:" lang)))
+	 (org-babel-eval-wipe-error-buffer)
+	 (if (equal type 'inline)
+	     (let ((raw (org-babel-execute-src-block
+			 nil info '((:results . "silent"))))
+		   (result-params (split-string
+				   (cdr (assoc :results (nth 2 info))))))
+	       (unless silent
+		 (cond ;; respect the value of the :results header argument
+		  ((member "file" result-params)
+		   (org-babel-result-to-file raw))
+		  ((or (member "raw" result-params)
+		       (member "org" result-params))
+		   (format "%s" raw))
+		  ((member "code" result-params)
+		   (format "src_%s{%s}" lang raw))
+		  (t
+		   (if (stringp raw)
+		       (if (= 0 (length raw)) "=(no results)="
+			 (format "%s" raw))
+		     (format "%S" raw))))))
+	   (prog1 nil
+	     (setf (nth 2 info)
+		   (org-babel-merge-params
+		    (nth 2 info)
+		    `((:results . ,(if silent "silent" "replace")))))
+	     (cond
+	      ((equal type 'block) (org-babel-execute-src-block nil info))
+	      ((equal type 'lob)
+	       (save-excursion
+		 (re-search-backward org-babel-lob-one-liner-regexp nil t)
+		 (org-babel-execute-src-block nil info)))))))))
+   ""))
+
+(provide 'ob-exp)
+
+;; arch-tag: 523abf4c-76d1-44ed-9f27-e3bddf34bf0f
+
+;;; ob-exp.el ends here